CDS

Accession Number TCMCG017C08082
gbkey CDS
Protein Id OMP04297.1
Location complement(join(11303..13081,13175..13247,13335..13453,13557..13628,13789..13899,14278..14319,14430..14522,14782..14883,14970..15114,15259..15789,15876..15965,16058..16305,16394..16492,16577..16665,17626..17854))
GeneID InterPro:IPR001965
Organism Corchorus olitorius
locus_tag COLO4_09751

Protein

Length 1273aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01014268.1
Definition Zinc finger, PHD-type [Corchorus olitorius]
Locus_tag COLO4_09751

EGGNOG-MAPPER Annotation

COG_category S
Description metal ion binding
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003700        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006952        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009607        [VIEW IN EMBL-EBI]
GO:0009620        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009909        [VIEW IN EMBL-EBI]
GO:0009911        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010228        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010638        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0031056        [VIEW IN EMBL-EBI]
GO:0031058        [VIEW IN EMBL-EBI]
GO:0031060        [VIEW IN EMBL-EBI]
GO:0031062        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031399        [VIEW IN EMBL-EBI]
GO:0031401        [VIEW IN EMBL-EBI]
GO:0031440        [VIEW IN EMBL-EBI]
GO:0031935        [VIEW IN EMBL-EBI]
GO:0031937        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032270        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0033043        [VIEW IN EMBL-EBI]
GO:0033044        [VIEW IN EMBL-EBI]
GO:0043207        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043565        [VIEW IN EMBL-EBI]
GO:0043954        [VIEW IN EMBL-EBI]
GO:0044030        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048366        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048468        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048580        [VIEW IN EMBL-EBI]
GO:0048582        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048827        [VIEW IN EMBL-EBI]
GO:0048831        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050684        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050832        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051052        [VIEW IN EMBL-EBI]
GO:0051094        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051130        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051240        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051247        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051570        [VIEW IN EMBL-EBI]
GO:0051574        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051707        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0060968        [VIEW IN EMBL-EBI]
GO:0061085        [VIEW IN EMBL-EBI]
GO:0061087        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070827        [VIEW IN EMBL-EBI]
GO:0070828        [VIEW IN EMBL-EBI]
GO:0070829        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090436        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0098542        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:0140110        [VIEW IN EMBL-EBI]
GO:1900109        [VIEW IN EMBL-EBI]
GO:1900111        [VIEW IN EMBL-EBI]
GO:1900363        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1902275        [VIEW IN EMBL-EBI]
GO:1903311        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1905269        [VIEW IN EMBL-EBI]
GO:2000024        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000241        [VIEW IN EMBL-EBI]
GO:2000243        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]
GO:2001252        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCATTTTCTGACGATGAAGAAGAAGAGACTGTAGTCAGTTCTGTCTCAAACTACTATTTCAATGATGAAAAAGAGGAGGCGGTTCCGTTTTCTGAGTTGCCACTTCAATTGGGGGGCAAAGAAACCCGTTCTAACGGTACTAAAAGGGACATTACTCTGAGAGGAACAGCGGATGATGGGCTCTTAACCATTTGCAAGCGTGTTACTGCATGGAAATTTGATCTGGGAAAGTGCATGAGATCGTTTCATGCAACTGAAGAAGCTGGTGAAGAATCCTCATGTGAATCTCTAGGCCTTACTAAGAAGCAAGTTGAAGCAATACCGACTTTCTTATGCAAGAATTGTGAATACAATCAGCATCAATGCTTCGTTTGTGGGAAGTTAGGCTCATCTGATAAGTCTGCTGGTGCGGAGGTCTTTCGCTGTGGTAATGCAACCTGTGGGCGCTTTTATCATCCAGATTGTGTGGCAAAATTGCTCCACAAGGGGGATAAAATTGCTGCAGAAGAGCATGGACAAAATATTTCTGCAGGGGAATTCTTTACATGCCCCATACATAAATGTTGTGTTTGTCAACGAGGAGAAAACAAGAAGGTTCTAGAGCTGCAGCTTGCTTTATGTAGAAGATGTCCCACATCATACCACAGGAAATGCTTACCAAGAGAAATTGCATTTGAAGATATTGATGAAGAAGGTATCAAAACAAGGGCTTGGGATGGTCTACTTGTCCACCGTGTACTGATATATTGCTTAAAACATAAGATCAGAGAAGACATTTTGACTCCAGAGAGGGACCATGTAAAATTCCCCTTTGTTAAGGAGAGGAAATTTGTTGCTGATGAAATGAAGAAAAGAAAGGCATCAGATTTACCCACGAGTCATGAAAAAGTTGGGTTGAAGAAAAGAAACGTTGCATTAGAAGACTCTTTACTAGAAAGAACTTCCATGAAAGCATCGAAGCAGTTGTCTTGTGTTACTAAAGATGATCAATCTAGCAAAAAGGCTGAAAAAGTTGCTCCTGGGACAAGTTCCCTTAAAAATGTCAAAGCAGGCGGTGCAACTAAAAGGCCTTTGAAAGGAATGCAGATGGGTAAATCCTCTGATGAAAACAAGATTTCGCTGGGTGACAGGCTTTACGCCCTTATGAACCAGGAGAGTGAACAGGTTAAGCCAGAGAAACAAGATATGCTCAGGAGTGGTCCTAACAAGCTTGCAATGGCCAAGCCTACTGCAAAAAATTTGAGCTCTGAAATCCCTTCGTTAGATGCTGATTCTGAGAGAAGATTATTGGCTATAATGAAGGAAGCTGAATCATCAATAAGTTTGGAAGATATCATAGCAGAGCACAAAGTTCCATCTACCACTACGTCTTTATCAAAAGGTGTTTTAGACAGAATTACTCGTGGAAAAATTGAGGGTTCAGTTGAGGCTGTTCGGGTGGCATTAGCAAAACTAGAAGCTGGCTGTAGCATTGAAGAAGCTCAAGCTGTTTGTGAGCCGGAGGTCCTGAACCAGCTATTTAAGTGGCAGAACAAACTCAAAGTGTGTCTTGCACCTTTCCTATATGGCATGCGTTACACATCTTTTGGTCGTCATTTTACTAAAGTGGATAAACTTAAAGAGATTGTTGATAGACTTCATTGGTATGTGCAAGATGGTGATATGATTGTCGACTTCTGTTGTGGTGCCAATGACTTTAGTTTACTAATGAAAAAAAAGCTTGAAGAGACGGGGAAGAAGTGCTCATACAAAAACTATGATATATTCCAAACAAAGAATGATTTTAATTTGGAGATAAGAGATTGGATGACTGTGCAACCAAAGGAGTTGCCCAAGGGGGCCCAATTGATAATGGGGCTAAATCCTCCTTTTGGAGTTAAAGCTGCTTTGGCAAACAAGTTTATCAATAAGGCTCTGGAGTTTAGTCCAAAATTATTGATCCTTATTGTTCCACCAGAAACTGAAAGGTTGGATAGAAAGAAAAATTTAAAATTTCCCTATGAATTAGTCTGGGAGGATAATCAATTTTTATCTGGAAAGTCATTTTACCTGCCTGGTTCTTTTGATGCAAATGACAAACAAATGGACCAATGGAATTTGATGGCTCCTCCTCTCTATCTTTGGAGTCGTTCTGATTTTTCAGCTAAGCACAAGAGCATAGCTGAAAAGCATGGGCACCTACATAGAAAACTCTCCAGTTTTAATCATGAAGGAAAGATCAACGAAACACACACATCTGGACAGCCATCGGACAATCGCAGTCAGGGTGATGATGCTTCTGAGTTGGAAGATCATAATCAAGATCCTAAAACTGAAGAACATATAGCGGCATCTGTGACTTTAACAGCAGCTCCAGAAGAATGCTCTCTTCACCAGCAGGGTGTTAGAGAAGGCCAAGACAATCACAGCAATGTGAATAGTCAGGCTGAGGAAACTGTGTTAAAGAATGTGAAGCATAGTGATGAGAATCATGGAAGGGGAACAGAGAGAAAATCACCTGTAGTTGGACAGAGTGGTGGAAAGACTCCTATAAATGAGACATACAGTGGAATACCTCACTCTTCTCCATCCAATGTGATGGGTGCTAAATCCGCCTTGGAGTGTAGACAAGAGGGATCTGCGATAGTGACAGAAAAAGAATTCTCTCTTTGCCACCAGGGTGAGAAAGAAGGCCAAGACATACGTGGCCATGTGGAGATCCAATTAAAGGAACCGTCGAAGGAGCAGATGAAGCTGAGCAATGAAAATCCGTCAAAGAAGCAGATGAAGCCGAGCAAGGAGAATCCGTCGAAGAAGCAGATGAAGCCGAGCAAGGAAAATCATGATAGGGGTTCAGCTGGAAAATCTTCCCTGGATGGACAGAGTGGTGGAAGGGCTCATATAAGTGAGAGGCATGGTGGTATTTCTCACTCTTCTTCATCCAATGTGAAGGGCGCTAAATCCTCAGTGGAGGGTAGACAAGAAGTACCTGTGACAGGAAAAGAATTATCTCCTCCCCATGAGGGTGAGAGAAAACGCCAAGACACACATGGCCATATGGAAAATCAATCCAAGGAAACCTCGAGGAAGAAGAAGCTGAGCAAGGAAATTCATGGTAGGGGATCGGATGGGAAGCCTCCTCTAGATGGACATAATGGTAGAAGGGCTCGTACAACTGAGAAGCATGGTGGAACTTCTCACTCTTCTGGATCTGGTAGATCTCCAGTGGATAGTTTCTCCTCCAAATCTCCTAAGATGGCAGCACGTCCTGGGATTGACGAGAATGTTCATCGGCATCCAAATCCCACCATGCGGGGTTCACAGGTTCATCCTGGCACTTCTTCATACAGTGACACCAGGACCAACATTGCTGATGGTATGGGAAGAAGATACAACATAAATAGCAGCCAGCCGTATCCAGTTGGAGCCGATCACTTTGGTTATAGACCTTACAGTACTGGAGTAGGGAGAGAATCTGATTTACGTGAACAAGTTCGCCTCTATGGGCATAATCCTAACGTATCTACTCAGAGAAATTATGTTCCGGGGTTGGATACTGCATACCCTCCTCCAATGGGGTCCTTGTCAACTCCGCCCTACGGACACCATGATGCTCCGGTTGGTCCATCTTACAGGATGAATACTTCTGCAACACAACGGTACGCTCCTCGACTAGATGAATTGAACTACACAAGGATGGGTACACCAGGGCCTGAACCACCCATGGGAATGGGATATTATGATCCTAGAGCACCCCGACCTCCTTACCCTATGGGTTTTGCCCCCGGTTCGTACCACCCTTATCCACATCAGCATTCGGCTGGTTGGCTCGATGACTAG
Protein:  
MAFSDDEEEETVVSSVSNYYFNDEKEEAVPFSELPLQLGGKETRSNGTKRDITLRGTADDGLLTICKRVTAWKFDLGKCMRSFHATEEAGEESSCESLGLTKKQVEAIPTFLCKNCEYNQHQCFVCGKLGSSDKSAGAEVFRCGNATCGRFYHPDCVAKLLHKGDKIAAEEHGQNISAGEFFTCPIHKCCVCQRGENKKVLELQLALCRRCPTSYHRKCLPREIAFEDIDEEGIKTRAWDGLLVHRVLIYCLKHKIREDILTPERDHVKFPFVKERKFVADEMKKRKASDLPTSHEKVGLKKRNVALEDSLLERTSMKASKQLSCVTKDDQSSKKAEKVAPGTSSLKNVKAGGATKRPLKGMQMGKSSDENKISLGDRLYALMNQESEQVKPEKQDMLRSGPNKLAMAKPTAKNLSSEIPSLDADSERRLLAIMKEAESSISLEDIIAEHKVPSTTTSLSKGVLDRITRGKIEGSVEAVRVALAKLEAGCSIEEAQAVCEPEVLNQLFKWQNKLKVCLAPFLYGMRYTSFGRHFTKVDKLKEIVDRLHWYVQDGDMIVDFCCGANDFSLLMKKKLEETGKKCSYKNYDIFQTKNDFNLEIRDWMTVQPKELPKGAQLIMGLNPPFGVKAALANKFINKALEFSPKLLILIVPPETERLDRKKNLKFPYELVWEDNQFLSGKSFYLPGSFDANDKQMDQWNLMAPPLYLWSRSDFSAKHKSIAEKHGHLHRKLSSFNHEGKINETHTSGQPSDNRSQGDDASELEDHNQDPKTEEHIAASVTLTAAPEECSLHQQGVREGQDNHSNVNSQAEETVLKNVKHSDENHGRGTERKSPVVGQSGGKTPINETYSGIPHSSPSNVMGAKSALECRQEGSAIVTEKEFSLCHQGEKEGQDIRGHVEIQLKEPSKEQMKLSNENPSKKQMKPSKENPSKKQMKPSKENHDRGSAGKSSLDGQSGGRAHISERHGGISHSSSSNVKGAKSSVEGRQEVPVTGKELSPPHEGERKRQDTHGHMENQSKETSRKKKLSKEIHGRGSDGKPPLDGHNGRRARTTEKHGGTSHSSGSGRSPVDSFSSKSPKMAARPGIDENVHRHPNPTMRGSQVHPGTSSYSDTRTNIADGMGRRYNINSSQPYPVGADHFGYRPYSTGVGRESDLREQVRLYGHNPNVSTQRNYVPGLDTAYPPPMGSLSTPPYGHHDAPVGPSYRMNTSATQRYAPRLDELNYTRMGTPGPEPPMGMGYYDPRAPRPPYPMGFAPGSYHPYPHQHSAGWLDD